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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910523.1_cds_XP_016460582.1_53991
CDS Infomation

[gene=LOC107784041] [db_xref=GeneID:107784041] [protein=GTP-binding protein TypA/BipA homolog] [protein_id=XP_016460582.1] [location=complement(join(46751..46834,47038..47088,47600..47683,47760..47810,48129..48215,48858..48907,49745..49818,50724..50848,50937..50991,51398..51461,51632..51752,56297..56395,57143..57268,57906..58043,59112..59281,59495..59563,59656..59806,61068..61142,65898..66221))] [gbkey=CDS]
Sequence

ATGGTCGGTCTGTTGCTTCGGTCTCTCTGGTCCACTACTAGAAACTCCTTCTCCTCTTCT
TCCCATTATTCCCGTATCAAACCCTTATCCTATGCTCGAGCTTTTTCCACCGCCACTGCC
ACCGCCACCGCTGCCGAGTCCGCCCCCGGCGGTGCTCTGGATCCTGGCCGCCTCAGGAAT
GTCGCGGTTATAGCTCACGTCGATCACGGCAAGACTACTCTCATGGATAGGCTCCTCCGC
CAGTGTGGCGCCGATATACCTCACGAGCGTGCCTTAGACTCCATTGACCTCGAAAGAGAG
CGCGGCATCACTATTGCCTCTAAGGTTACATCCATCTCGTGGAAGGACAAAGAGCTTAAC
ATGGTGGACACTCCTGGACACGCGGATTTTGGTGGTGAAGTTGAGAGGGTTGTTGGGATG
GTTGAGGGAGCAGTACTAGTTGTTGATGCTGGTGAAGGTCCACTTGCTCAGACAAAATTC
GTTCTTGCCAAGGCCCTAAAATATGGTTTACGCCCCATTCTTCTTCTCAATAAAGTAGAC
AAACCTGCAGTGACTGAAGAGAGATGTAATGAAGTCGAGAGCCTTGTATTTGACCTTTTC
GCAAACCTTGGCGCTTCAGAGGAACAATTAGATTTTCCTGTTCTTTATGCCTCGGCGAAA
GAAGGATGGGCATCTTCCACATATACAAAATGTCCTAATGATGTGAAGGATATGTCACAG
TTGCTTGATGCGATTATTGGGCATGTTCCTCCTCCAAGTGCCAGCATAGATGCCCCTTTT
CAGATGTTGGTTTCCATGATGGAGAAAGATCCTTACCTTGGTCGTGTTTTGACGGGCCGT
GTATCTTATGGAGTTGTTCGTGTGGGTGATAGAGTACATGGGCTTAAGAAGACAGAAGAT
GGAACTGTAAAACTTGAAGAAGGAAAGATTGTAAAGCTGATGAAAAAGAAGGGTATGAGA
CCAGATCCAGTTGATAGTGCTGGTGCAGGTGACATAGTGTCAATGGCAGGGTTGTCTAGT
CCGACAATTGGACACACAGTTGCAAATGTGGAGGTTATGACAGCATTACCTACTGTTGAG
CTTGATCCCCCTACCATCTCCATGACTTTTGGTGTCAATGATTCTCCCTTGGCTGGTTCT
GATGGTATTCATTTGACTGGAGGGAAAATTGGTGACCGGCTGCTAGCTGAAGCAGAAACA
AATCTCGCCATAAATGTTCTCCCCAGTACGTCAGAATCATATGAAGTGCAGGGTAGAGGT
GAACTCCAATTAGGCATCTTAATTGAGAACATGAGACGTGAAGGATTTGAGCTCTCTGTC
TCCCCACCTAAAGTCATGTACAAAGTAGAGAAAAGTGTGAAGCTTGAGCCAATTGAAGAA
GTGACTATTGAGGTTGATGACGAGCATGTAGGTTTGGTCATGGAAGCACTTTCTCATAGG
CGAGGTGAAGTTACTGACATGGGCCCTGTTCCTGGCAACACGGGAAGGACAAGAATGTGT
CTTACATGTCCTTCAAGAGGGCTAGTTGGCTATAGAAGCGTGTTCAGCAGTGACACCCGT
GGCGCTGGATTTATGCACCGGGCATTTCTAACTTATGAAAAATATCGTGGTCCTCTTGGA
AATGTCAGGAAAGGAGTACTAGTATCGATGGGCCGCGGGTTAATCACTGCTCATGCTCTT
ATGAATTTAGAAGCTCGTGGAATTCTCTTTGTGGCACCTGGGATGGAGACATATGATGGC
ATGATTATTGGAGAGCATTCTCGAGATACCGATCTTGATGTCAACCCGGTTAGGACAAAA
GAACTCACCAATGTAAGGGCTGCTTGCAAGGATGAGAATGTGAGGTTAACTCCTCCCCGC
CTTATGAGTCTTGAAGAAGCCATAGGATATGTTGCTTCGGATGAGCTTATTGAGGTTACG
CCAAAAGCCATTAGACTAAGGAAGAGATACCTGGAAGTGAACAAAAGAAAACAAATGAGC
AAGAGACCCAAGGATTGA

Peptide Sequence

PEP ID

XP_016460582.1
PEP Infomation

PREDICTED: GTP-binding protein TypA/BipA homolog [Nicotiana tabacum]
Sequence

MVGLLLRSLWSTTRNSFSSSSHYSRIKPLSYARAFSTATATATAAESAPGGALDPGRLRN
VAVIAHVDHGKTTLMDRLLRQCGADIPHERALDSIDLERERGITIASKVTSISWKDKELN
MVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVD
KPAVTEERCNEVESLVFDLFANLGASEEQLDFPVLYASAKEGWASSTYTKCPNDVKDMSQ
LLDAIIGHVPPPSASIDAPFQMLVSMMEKDPYLGRVLTGRVSYGVVRVGDRVHGLKKTED
GTVKLEEGKIVKLMKKKGMRPDPVDSAGAGDIVSMAGLSSPTIGHTVANVEVMTALPTVE
LDPPTISMTFGVNDSPLAGSDGIHLTGGKIGDRLLAEAETNLAINVLPSTSESYEVQGRG
ELQLGILIENMRREGFELSVSPPKVMYKVEKSVKLEPIEEVTIEVDDEHVGLVMEALSHR
RGEVTDMGPVPGNTGRTRMCLTCPSRGLVGYRSVFSSDTRGAGFMHRAFLTYEKYRGPLG
NVRKGVLVSMGRGLITAHALMNLEARGILFVAPGMETYDGMIIGEHSRDTDLDVNPVRTK
ELTNVRAACKDENVRLTPPRLMSLEEAIGYVASDELIEVTPKAIRLRKRYLEVNKRKQMS
KRPKD

Transcript Sequence

Gene sequence data has not been registered.